FileBot

is there a way to make my anime files look like this?

M:/Animation/High School DxD/


- Speacials/
-High School DxD - S00E07 - Boobs Bloom! [720p]
-High School DxD - S00E08 - I'm Searching for Breasts! [720p]

- Season 1/
-High School DxD - S01E01 - I Got a Girlfriend! [720p]
-High School DxD - S01E02 - I Stopped Being a Human! [720p]

- Season 2/
-High School DxD - S02E01 - Another Disquieting Premonition! [720p]
-High School DxD - S02E02 - The Holy Sword is Here! [720p]

Yes, assuming TheTVDB data matches what you want. Please read the docs.

Expressions Guide linked on the front page:
http://www.filebot.net/naming.html

More Expressions Guide here in the forums with LOTS of examples:
viewtopic.php?f=5&t=2

Whole forum full of Expressions Guide for specific use-cases:
viewforum.php?f=5